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Structure of the Plasminogen Kringle 4 Binding Calcium-Free Form of the C-Type Lectin-Like Domain of Tetranectin
Steen Nielbo, Jens K. Thomsen, Jonas H. Graversen, Peter Holme Jensen, Michael Etzerodt, Flemming M. Poulsen and Hans Christian Thøgersen Biochemistry 43(27) 8636 (2004) https://doi.org/10.1021/bi049570s
1H NMR Characterization of the Solution Active Site Structure of Substrate-Bound, Cyanide-Inhibited Heme Oxygenase from Neisseria meningitidis: Comparison to Crystal Structures
Solution NMR Studies of the Aβ(1−40) and Aβ(1−42) Peptides Establish that the Met35 Oxidation State Affects the Mechanism of Amyloid Formation
Liming Hou, Haiyan Shao, Yongbo Zhang, Hua Li, Nanda K. Menon, Elizabeth B. Neuhaus, John M. Brewer, In-Ja L. Byeon, Dale G. Ray, Michael P. Vitek, Takashi Iwashita, Ronald A. Makula, Alan B. Przybyla and Michael G. Zagorski Journal of the American Chemical Society 126(7) 1992 (2004) https://doi.org/10.1021/ja036813f
Identification and Characterization of Small Molecule Inhibitors of the Calcium-Dependent S100B−p53 Tumor Suppressor Interaction
Joseph Markowitz, Ijen Chen, Rossi Gitti, Donna M. Baldisseri, Yongping Pan, Ryan Udan, France Carrier, Alexander D. MacKerell, and David J. Weber Journal of Medicinal Chemistry 47(21) 5085 (2004) https://doi.org/10.1021/jm0497038
Synthesis and Structure−Activity Relationships of 5,6,7,8-Tetrahydro-4H-thieno[3,2-b]azepine Derivatives: Novel Arginine Vasopressin Antagonists
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Disulfide Bonding Arrangements in Active Forms of the Somatomedin B Domain of Human Vitronectin
Yuichi Kamikubo, Roberto De Guzman, Gerard Kroon, Scott Curriden, Jaap G. Neels, Michael J. Churchill, Philip Dawson, Stanisław Ołdziej, Anna Jagielska, Harold A. Scheraga, David J. Loskutoff and H. Jane Dyson Biochemistry 43(21) 6519 (2004) https://doi.org/10.1021/bi049647c
Solution structures of the C‐terminal headpiece subdomains of human villin and advillin, evaluation of headpiece F‐actin‐binding requirements
Wim Vermeulen, Peter Vanhaesebrouck, Marleen Van Troys, Mieke Verschueren, Franky Fant, Marc Goethals, Christophe Ampe, José C. Martins and Frans A.M. Borremans Protein Science 13(5) 1276 (2004) https://doi.org/10.1110/ps.03518104
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Rescuing cystic fibrosis transmembrane conductance regulator (CFTR)-processing mutants by transcomplementation
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Solution structure and domain architecture of the divisome protein FtsN
Solution Structure of the Two-Iron Rubredoxin of Pseudomonas oleovorans Determined by NMR Spectroscopy and Solution X-ray Scattering and Interactions with Rubredoxin Reductase,
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Potent Cyclic Antagonists of the Complement C5a Receptor on Human Polymorphonuclear Leukocytes. Relationships between Structures and Activity
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NMR Solution Structure of an Oxaliplatin 1,2-d(GG) Intrastrand Cross-link in a DNA Dodecamer Duplex
Yibing Wu, Padmanava Pradhan, Jody Havener, Gunnar Boysen, James A. Swenberg, Sharon L. Campbell and Stephen G. Chaney Journal of Molecular Biology 341(5) 1251 (2004) https://doi.org/10.1016/j.jmb.2004.06.066
Possible role of region 152–156 in the structural duality of a peptide fragment from sheep prion protein
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Structure-Selectivity Relationships and Structure for a Peptide-Based Enantioselective Acylation Catalyst
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Hydrogen Bonding on the Ice-Binding Face of a β-Helical Antifreeze Protein Indicated by Amide Proton NMR Chemical Shifts
The solution structure of rat Aβ-(1–28) and its interaction with zinc ion: insights into the scarcity of amyloid deposition in aged rat brain
Jin Huang, Yong Yao, Jun Lin, Yong-Hao Ye, Wei-Yin Sun and Wen-Xia Tang† JBIC Journal of Biological Inorganic Chemistry 9(5) 627 (2004) https://doi.org/10.1007/s00775-004-0556-x
An Oxidative Phenol Coupling Reaction Catalyzed by OxyB, a Cytochrome P450 from the Vancomycin‐Producing Microorganism
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Solution structure of long neurotoxin NTX‐1 from the venom of Naja naja oxiana by 2D‐NMR spectroscopy
Mehdi Talebzadeh‐Farooji, Mehriar Amininasab, Maryam M. Elmi, Hossein Naderi‐Manesh and Mohammad N. Sarbolouki European Journal of Biochemistry 271(23-24) 4950 (2004) https://doi.org/10.1111/j.1432-1033.2004.04465.x
Membrane Protein–Lipid Interactions in Mixed Micelles Studied by NMR Spectroscopy with the Use of Paramagnetic Reagents
Structure−Activity Study on the Phe Side Chain Arrangement of Endomorphins Using Conformationally Constrained Analogues
Csaba Tömböly, Katalin E. Kövér, Antal Péter, Dirk Tourwé, Dauren Biyashev, Sándor Benyhe, Anna Borsodi, Mahmoud Al-Khrasani, András Z. Rónai and Géza Tóth Journal of Medicinal Chemistry 47(3) 735 (2004) https://doi.org/10.1021/jm0310028
A (4R)‐ or a (4S)‐Fluoroproline Residue in Position Xaa of the (Xaa‐Yaa‐Gly) Collagen Repeat Severely Affects Triple‐Helix Formation
κM-Conotoxin RIIIK, Structural and Functional Novelty in a K+ Channel Antagonist
Ahmed Al-Sabi, Dirk Lennartz, Michael Ferber, Jozsef Gulyas, Jean E. F. Rivier, Baldomero M. Olivera, Teresa Carlomagno and Heinrich Terlau Biochemistry 43(27) 8625 (2004) https://doi.org/10.1021/bi0495681
Origins of Helix−Coil Switching in a Light-Sensitive Peptide
Darcy C. Burns, Daniel G. Flint, Janet R. Kumita, Howard J. Feldman, Luis Serrano, Zhihua Zhang, Oliver S. Smart and G. Andrew Woolley Biochemistry 43(49) 15329 (2004) https://doi.org/10.1021/bi048152k
Georg Kontaxis, Klaus Bister and Robert Konrat (2004) https://doi.org/10.1002/0470028637.met022
Interaction of harmine with oligonucleotide d(GTGCAC)2
Semisynthesis of a segmental isotopically labeled protein splicing precursor: NMR evidence for an unusual peptide bond at the N-extein–intein junction
Alessandra Romanelli, Alexander Shekhtman, David Cowburn and Tom W. Muir Proceedings of the National Academy of Sciences 101(17) 6397 (2004) https://doi.org/10.1073/pnas.0306616101
Solution structure of Cu6 metallothionein from the fungus Neurospora crassa
Solution Structure and Functional Characterization of SGTx1, a Modifier of Kv2.1 Channel Gating,
Chul Won Lee, Sunghwan Kim, Soung Hun Roh, Hiroshi Endoh, Yoshio Kodera, Tadakazu Maeda, Toshiyuki Kohno, Julia M. Wang, Kenton J. Swartz and Jae Il Kim Biochemistry 43(4) 890 (2004) https://doi.org/10.1021/bi0353373
Analysis of the p-tert-butylcalix[4]arene bis-crown Derivative (Dc3)-Acetonitrile Host−Guest Complexing Behavior by Nuclear Magnetic Resonance (NMR) Spectroscopy and Computational Methods
C. Bonechi, A. Donati, S. Martini, C. Rossi, A. Arduini, A. Pochini, B. Lonetti and P. Baglioni The Journal of Physical Chemistry B 108(23) 7603 (2004) https://doi.org/10.1021/jp037464e
Binding Mechanism of Nonspecific Lipid Transfer Proteins and Their Role in Plant Defense
Chao-Sheng Cheng, Dharmaraj Samuel, Yaw-Jen Liu, Je-Chyi Shyu, Szu-Ming Lai, Ku-Feng Lin and Ping-Chiang Lyu Biochemistry 43(43) 13628 (2004) https://doi.org/10.1021/bi048873j
N-Terminal Domain Linkage Modulates the Folding Properties of Protein S Epidermal Growth Factor-like Modules
Nyoman D. Kurniawan, Joanne M. O'Leary, Ann-Marie Thamlitz, Raphael Sofair, Jörn M. Werner, Johan Stenflo and A. Kristina Downing Biochemistry 43(29) 9352 (2004) https://doi.org/10.1021/bi0492105
Heme axial methionine fluxionality in
Hydrogenobacter thermophilus
cytochrome
c
552
Linghao Zhong, Xin Wen, Terry M. Rabinowitz, Brandy S. Russell, Elizabeth F. Karan and Kara L. Bren Proceedings of the National Academy of Sciences 101(23) 8637 (2004) https://doi.org/10.1073/pnas.0402033101
The dimerization domain of the HIV‐1 capsid protein binds a capsid protein‐derived peptide: A biophysical characterization
María T. Garzón, María C. Lidón‐Moya, Francisco N. Barrera, Alicia Prieto, Javier Gómez, Mauricio G. Mateu and José L. Neira Protein Science 13(6) 1512 (2004) https://doi.org/10.1110/ps.03555304
Aqueous and Micelle-bound Structural Characterization of the Epidermal Growth Factor Receptor Juxtamembrane Domain Containing Basolateral Sorting Motifs
Kiattawee Choowongkomon, Michael E. Hobert, Cheng He, Cathleen R. Carlin and Frank D. Sönnichsen Journal of Biomolecular Structure and Dynamics 21(6) 813 (2004) https://doi.org/10.1080/07391102.2004.10506971
Structural Studies on the Ca2+-binding Domain of Human Nucleobindin (Calnuc)
Structural and Dynamic Studies on Ligand-Free Adenylate Kinase from Mycobacterium tuberculosis Revealed a Closed Conformation that Can Be Related to the Reduced Catalytic Activity,
NMR Structure Determination of a Modified DNA Oligonucleotide Containing a New Intercalating Nucleic Acid
Christina B. Nielsen, Michael Petersen, Erik B. Pedersen, Poul Erik Hansen and Ulf B. Christensen Bioconjugate Chemistry 15(2) 260 (2004) https://doi.org/10.1021/bc0341932
Solvent Interactions and Protein Dynamics in Spin-labeled T4 Lysozyme
Distributed Computing and NMR Constraint-Based High-Resolution Structure Determination: Applied for Bioactive Peptide Endothelin-1 To Determine C-Terminal Folding
Hiroyuki Takashima, Norio Mimura, Tadayasu Ohkubo, Takuya Yoshida, Haruhiko Tamaoki and Yuji Kobayashi Journal of the American Chemical Society 126(14) 4504 (2004) https://doi.org/10.1021/ja031637w
Epitope Mapping of the Phosphorylation Motif of the HIV-1 Protein Vpu Bound to the Selective Monoclonal Antibody Using TRNOESY and STD NMR Spectroscopy
Josyane Gharbi-Benarous, Gildas Bertho, Nathalie Evrard-Todeschi, Gaël Coadou, Simon Megy, Thierry Delaunay, Richard Benarous and Jean-Pierre Girault Biochemistry 43(46) 14555 (2004) https://doi.org/10.1021/bi0492861
Recognition of Planar and Nonplanar Ligands in the Malachite Green–RNA Aptamer Complex
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Induction and displacement of an α helix in the 6725 SERA peptide analogue confers protection against P. falciparum malaria
Martha Patricia Alba, Luz Mary Salazar, Jindra Purmova, Magnolia Vanegas, Raul Rodriguez and Manuel Elkin Patarroyo Vaccine 22(9-10) 1281 (2004) https://doi.org/10.1016/j.vaccine.2003.08.046
Dissection of Human Tropoelastin: Solution Structure, Dynamics and Self‐Assembly of the Exon 5 Peptide
Brigida Bochicchio, Nicolas Floquet, Antonietta Pepe, Alain J. P. Alix and Antonio M. Tamburro Chemistry – A European Journal 10(13) 3166 (2004) https://doi.org/10.1002/chem.200305661
Micellar environments induce structuring of the N‐terminal tail of the prion protein
Christian Renner, Stella Fiori, Ferdinando Fiorino, Dirk Landgraf, Dominga Deluca, Matthias Mentler, Klaus Grantner, Fritz G. Parak, Hans Kretzschmar and Luis Moroder Biopolymers 73(4) 421 (2004) https://doi.org/10.1002/bip.20015
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Solution Structure of BmKK4, the First Member of Subfamily α-KTx 17 of Scorpion Toxins,
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Solution structure of Phrixotoxin 1, a specific peptide inhibitor of Kv4 potassium channels from the venom of the theraphosid spider Phrixotrichus auratus
Benjamin Chagot, Pierre Escoubas, Elba Villegas, Cédric Bernard, Gilles Ferrat, Gerardo Corzo, Michel Lazdunski and Hervé Darbon Protein Science 13(5) 1197 (2004) https://doi.org/10.1110/ps.03584304
Factors involved in the stability of isolated β‐sheets: Turn sequence, β‐sheet twisting, and hydrophobic surface burial
Solution Structure of Amyloid β-Peptide (25−35) in Different Media
Anna M. D'Ursi, Maria R. Armenante, Remo Guerrini, Severo Salvadori, Giuseppe Sorrentino and Delia Picone Journal of Medicinal Chemistry 47(17) 4231 (2004) https://doi.org/10.1021/jm040773o
Conformational Studies of Peptides Containing cis-3-Hydroxy-d-proline
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Structure–activity relationships and structural conformation of a novel urotensin II-related peptide
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NMR structure of the thromboxane A2 receptor ligand recognition pocket
Structural Investigation of the HIV‐1 Envelope Glycoprotein gp160 Cleavage Site 3: Role of Site‐Specific Mutations
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Solution structure of 2′,5′ d(G4C4)
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Solution structure of the cyclic peptide contryphan‐Vn, a Ca2+‐dependent K+ channel modulator
Tommaso Eliseo, Daniel Oscar Cicero, Cristina Romeo, Maria Eugenia Schininà, Gabriella Raybaudi Massilia, Fabio Polticelli, Paolo Ascenzi and Maurizio Paci Biopolymers 74(3) 189 (2004) https://doi.org/10.1002/bip.20025
NMR structure of the KaiC-interacting C-terminal domain of KaiA, a circadian clock protein: Implications for KaiA–KaiC interaction
Ioannis Vakonakis, Jingchuan Sun, Tianfu Wu, Andreas Holzenburg, Susan S. Golden and Andy C. LiWang Proceedings of the National Academy of Sciences 101(6) 1479 (2004) https://doi.org/10.1073/pnas.0305516101
NMR Structure of a Cyclic Polyamide−DNA Complex
Qing Zhang, Tammy J. Dwyer, Vickie Tsui, David A. Case, Junhyeong Cho, Peter B. Dervan and David E. Wemmer Journal of the American Chemical Society 126(25) 7958 (2004) https://doi.org/10.1021/ja0373622
NMR-based Structural Studies of the Glycosylated MUC1 Tandem Repeat Peptide
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Prediction of pKa shifts in proteins using a combination of molecular mechanical and continuum solvent calculations
Bernd Kuhn, Peter A. Kollman and Martin Stahl Journal of Computational Chemistry 25(15) 1865 (2004) https://doi.org/10.1002/jcc.20111
NMR Solution Structure of a Peptide from the mdm-2 Binding Domain of the p53 Protein that Is Selectively Cytotoxic to Cancer Cells,
Orientation and helical conformation of a tissue‐specific hunter‐killer peptide in micelles
Leigh A. Plesniak, Jonathan I. Parducho, Angie Ziebart, Bernhard H. Geierstanger, Jennifer A. Whiles, Guiseppe Melacini and Patricia A. Jennings Protein Science 13(8) 1988 (2004) https://doi.org/10.1110/ps.04853204
Flexibility in the P2 domain of the HIV‐1 Gag polyprotein
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Sequential oligopeptide carriers, SOCn, as scaffolds for the reconstitution of antigenic proteins: applications in solid phase immunoassays
Maria Sakarellos-Daitsiotis, Charalampos Alexopoulos and Constantinos Sakarellos Journal of Pharmaceutical and Biomedical Analysis 34(4) 761 (2004) https://doi.org/10.1016/S0731-7085(03)00561-2
The conformation and movement of Na+ channel inactivation gate peptide in linker between domain III and IV during inactivation by NMR spectroscopy and molecular modeling study
Identification of a SUMO-binding motif that recognizes SUMO-modified proteins
Jing Song, Linda K. Durrin, Thomas A. Wilkinson, Theodore G. Krontiris and Yuan Chen Proceedings of the National Academy of Sciences 101(40) 14373 (2004) https://doi.org/10.1073/pnas.0403498101
An Unusual Reverse Turn Structure Adopted by a Furanoid Sugar Amino Acid Incorporated in Gramicidin S
Gijsbert M. Grotenbreg, Mattie S. M. Timmer, Antonio L. Llamas-Saiz, Martijn Verdoes, Gijsbert A. van der Marel, Mark J. van Raaij, Herman S. Overkleeft and Mark Overhand Journal of the American Chemical Society 126(11) 3444 (2004) https://doi.org/10.1021/ja0397254